Does it look like this?
If so, an old-timer cactus grower told me his theory of how these spots form. He said that Trich's (in my area) are particularly susceptible to it during colder temps (40's to 50's) and when humidity is in the 40% - 60% range.
As far as recovery goes, I just leave em. Yes, they make for crappy looking cacti but in the long run, they seem to heal up nicely and not be bothered.
For prevention, the old-timer recommended spraying them with VERY dilute mixture of bleach water when you know the temps are going to be low with "high" humidity. I have not tried this but it would be good to know for us all.
I'll definitely be taking Nobody's advice and trying a faster draining soil with the bridgesii. It's difficult though because I live in an incredibly dry environment, for the most part, and getting enough water to Trichs is the biggest concern.
Also, more spots tend to show up after a few days of getting bridgesii in the mail. Anywhere the skin has been damaged (i.e. by other spines), the spots will form there as well.
I'll dig around on another forum, I've seen more information on exactly this problem.
The first two pictures, you can see what older spots of infection start to look like.
In the third picture, there's a new infection on top and a more healed one below.